TABLE 3.

Introns in D. bruxellensis genes

S. cerevisiae ortholog5′ MotifaBranch Motif3′ MotifIntron lengthb (bp)
Systematic nameStandard nameD. bruxellensisS. cerevisiae
YBL001C ECM15 GTAAGTTACTAACCAG65NA
YBL050W SEC17 TATTAACTAG
YBR159WYBR159WGTATGTTACTAACCAG79NA
YBR189W RPS9B GTAAGTTACTAACTAG344413
YDL082W RPL13A TACTAACTAG
YDL108W KIN28 TAATAATAAG
YDL125C HNT1 GTAAGTTACTAACAAG65111
YDR025W RPS11A GTATGCTACTAACTAG403339
YDR064W RPS13 TACTAACTAG
YDR092W UBC13 GTATGTTACTAACAAG61268
YDR367WYDR367WGACTAACTAG
YDR424C DYN2 TACTAACTAG
YDR424C DYN2 GTAAGTTACTAACCAG12580
YDR471W RPL27B TACTAACTAG
YER009W NTF2 GTAAGTTACTAACTAG260NA
YGL076C RPL7A TACTAACTAG
YGL076C RPL7A GTAAGTTACTAACCAG276468
YGL103W RPL28 GTAAGTTACTAACTAG419511
YGR029W ERV1 GTAAGTTACTAACTAG14383
YGR243WYGR243WGTAAGTTACTAACAAG118NA
YHL001W RPL14B TACTAACTAG
YHR001W-A QCR10 GTAAGTTACTAACCAG6763
YHR016C YSC84 GTATGTTACTAACCAG113168
YHR021C RPS27B AACTAATTAG
YIL018W RPL2B TACTAACCAG
YIL069C RPS24B TACTAACTAG
YIL133C RPL16A TACTAACCAG
YJL191W RPS14B TACTAACCAG
YKR057W RPS21A TACTAACTAG
YLR185W RPL37A TACTAACCAG
YLR306W UBC12 GTAAGTTACTAACCAG65134
YLR344W RPL26A GTATGTTACTAACTAG357447
YLR448W RPL6B TACTAACTAG
YML067C ERV41 GTAAGTTACTAACCAG9293
YML094W GIM5 GTAAGTTACTAACCAG7583
YMR116C ASC1 TACTAACTAG
YMR143W RPS16A GTATGTTACTAACTAG359544
YMR194W RPL36A GTATGTAACTAACCAG472463
YNL310CYNL310CGTAAGTTACTAACTAG77NA
YNR053C NOG2 TACTAACAAG
YOL120C RPL18A GTAAGTTACTAACTAG328447
YOL127W RPL25 TACTAACTAG
YOL132W GAS4 GTAGGTTACTAACCAG62NA
YOL146W PSF3 GTAAGTTACTAACTAG65NA
YOR122C PFY1 GTAAGTTACTAACCAG161209
YOR182C RPS30B TACTAACCAG
YPL090C RPS6A GTATGTTACTAACCAG357394
YPL143W RPL33A GTAAGTTACTAACTAG359525
YPR028W YOP1 TACTAACTAG
YPR062W FCY1 GTAAGTTACTAACCAG100NA
  • a —, the start of the intron is not present in our sequence data; for these cases, the intron length cannot be given.

  • b Where the intron length is known in D. bruxellensis, the length of the corresponding intron in S. cerevisiae is given for comparative purposes. NA, the orthologous gene in S. cerevisiae does not contain an intron.