TABLE 3.

Introns in D. bruxellensis genes

S. cerevisiae ortholog5′ MotifaBranch Motif3′ MotifIntron lengthb (bp)
Systematic nameStandard nameD. bruxellensisS. cerevisiae
YBL001CECM15GTAAGTTACTAACCAG65NA
YBL050WSEC17TATTAACTAG
YBR159WYBR159WGTATGTTACTAACCAG79NA
YBR189WRPS9BGTAAGTTACTAACTAG344413
YDL082WRPL13ATACTAACTAG
YDL108WKIN28TAATAATAAG
YDL125CHNT1GTAAGTTACTAACAAG65111
YDR025WRPS11AGTATGCTACTAACTAG403339
YDR064WRPS13TACTAACTAG
YDR092WUBC13GTATGTTACTAACAAG61268
YDR367WYDR367WGACTAACTAG
YDR424CDYN2TACTAACTAG
YDR424CDYN2GTAAGTTACTAACCAG12580
YDR471WRPL27BTACTAACTAG
YER009WNTF2GTAAGTTACTAACTAG260NA
YGL076CRPL7ATACTAACTAG
YGL076CRPL7AGTAAGTTACTAACCAG276468
YGL103WRPL28GTAAGTTACTAACTAG419511
YGR029WERV1GTAAGTTACTAACTAG14383
YGR243WYGR243WGTAAGTTACTAACAAG118NA
YHL001WRPL14BTACTAACTAG
YHR001W-AQCR10GTAAGTTACTAACCAG6763
YHR016CYSC84GTATGTTACTAACCAG113168
YHR021CRPS27BAACTAATTAG
YIL018WRPL2BTACTAACCAG
YIL069CRPS24BTACTAACTAG
YIL133CRPL16ATACTAACCAG
YJL191WRPS14BTACTAACCAG
YKR057WRPS21ATACTAACTAG
YLR185WRPL37ATACTAACCAG
YLR306WUBC12GTAAGTTACTAACCAG65134
YLR344WRPL26AGTATGTTACTAACTAG357447
YLR448WRPL6BTACTAACTAG
YML067CERV41GTAAGTTACTAACCAG9293
YML094WGIM5GTAAGTTACTAACCAG7583
YMR116CASC1TACTAACTAG
YMR143WRPS16AGTATGTTACTAACTAG359544
YMR194WRPL36AGTATGTAACTAACCAG472463
YNL310CYNL310CGTAAGTTACTAACTAG77NA
YNR053CNOG2TACTAACAAG
YOL120CRPL18AGTAAGTTACTAACTAG328447
YOL127WRPL25TACTAACTAG
YOL132WGAS4GTAGGTTACTAACCAG62NA
YOL146WPSF3GTAAGTTACTAACTAG65NA
YOR122CPFY1GTAAGTTACTAACCAG161209
YOR182CRPS30BTACTAACCAG
YPL090CRPS6AGTATGTTACTAACCAG357394
YPL143WRPL33AGTAAGTTACTAACTAG359525
YPR028WYOP1TACTAACTAG
YPR062WFCY1GTAAGTTACTAACCAG100NA
  • a —, the start of the intron is not present in our sequence data; for these cases, the intron length cannot be given.

  • b Where the intron length is known in D. bruxellensis, the length of the corresponding intron in S. cerevisiae is given for comparative purposes. NA, the orthologous gene in S. cerevisiae does not contain an intron.