TABLE 1.

Genes and/or ORFs expressed differentially in biofilm cells

ORFaExpression (fold change)b at:Gene; ORF (assembly 19)c
T = 30T = 90T = 150T = 270T = 390
Homology in S. cerevisiae
    6.46941.02.83.34.51.0SUL1; ORF19.10252
    6.798422.922.016.026.912.6MET3; ORF19.5025
    6.32043.23.82.64.02.4MET10; ORF19.4076
    6.68372.42.22.32.91.9ECM17; ORF19.4099
    6.81954.15.44.05.02.2MET14; ORF19.946
    6.45149.910.310.614.55.4MET15; ORF19.5645
    6.25023.35.25.04.31.7HAL21; ORF19.99
    6.25083.75.65.44.91.7HAL22; ORF19.105
    6.31341.42.82.52.51.8ORF19.1159; CYS A homolog
    6.69133.55.74.66.31.0OPT3; ORF19.5673
    6.1607−1.91.01.02.42.8GCS1; ORF19.5060
    6.48393.26.65.78.19.3NCE103; ORF19.1721
    6.789822.617.018.87.510.3PHO89; ORF19.4599
    6.22996.48.67.95.78.9ORF19.3936; similar to PHO81
    6.58956.95.64.37.54.8AAH1; ORF19.2251
    6.79991.01.71.02.22.3DIM1; ORF19.5010
    6.2541.01.01.02.22.7KRR1; ORF19.8277
    6.27091.01.41.02.33.1RRP8; ORF19.3630
    6.81143.85.79.412.624.3ORF19.7214; similar to 1,3-glucosidase
    6.37331.21.71.33.83.9ORF19.3088; similar to S. cerevisiae YDR184
    6.30681.62.82.43.1−1.6AGP3; ORF19.3795
    6.20841.03.94.04.22.4YMC2; ORF19.4733
    6.64871.71.71.52.12.6ABP140; ORF19.3676
    6.10782.32.52.02.71.6PUS7; ORF19.9322
    6.9722.11.61.72.52.2POL5; ORF19.13042
    6.91322.72.12.02.02.7ORF19.5905; similar to S. cerevisiae YBL028C
    6.48496.05.94.22.13.4ORF19.5777; similar to S. cerevisiae YBR096W
    6.33871.01.01.02.73.2ORF19.5049; similar to S. cerevisiae YLR003
    6.3371.01.51.42.62.3ORF19.2527; similar to S. cerevisiae YNL035c
    6.20761.31.31.22.12.0ORF19.1388; similar to S. cerevisiae YER002
No homology in S. cerevisiae
    6.17425.026.232.424.479.9AMO2; ORF19.3152
    6.75811.72.83.46.53.5ASM3; ORF19.6037
    6.2412.21.03.598.486.2POL93; ORF19.6078
    6.2581.02.42.41.62.1SSP96; ORF19.5145
    6.230675.6104.793.185.649.2ORF19.1539
    6.88079.17.98.412.155.3ORF19.6824
    6.43762.34.43.94.114.5ORFORF19.1797
    6.2836.37.87.45.51.0ORF19.4424
    6.1021.02.78.82.33.8LDG3; ORF19.6486.
    6.67841.02.52.12.92.5ORF19.6675
    6.71841.32.52.63.22.9ORF19.6920
  • a Assembly 6.

  • b Positive or negative values represent the fold changes of up- or downregulated genes, respectively.

  • c Gene names may also be found at http://agabian.ucsf.edu/.