*a**P*value [−log_{10}(*P*)] for TFM enrichment relative to clustered genes (2,388)/*P*value [−log_{10}(*P*)] for TFM enrichment relative to the genome.*b**P*value [−log_{10}(*P*)] for MIPS functional category enrichment.*c*STRE (AGGGG) has been listed as the binding site for Msn2, Msn4, Gis1, and/or Rph1 by different authors (see citations above).*d*See Table S2 in the supplemental material for an explanation of numbered motifs. F, functional motif; C, coherent motif (17).↵

*e*SOM clustering with 1D ring topology (*K*= 18).