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Eukaryotic Cell, February 2008, p. 286-293, Vol. 7, No. 2
1535-9778/08/$08.00+0 doi:10.1128/EC.00276-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.


Laboratory of Molecular Cell Biology, Institute of Botany and Microbiology, Katholieke Universiteit Leuven, and Department of Molecular Microbiology, VIB, Kasteelpark Arenberg 31, B-3001 Leuven-Heverlee, Flanders, Belgium
Received 31 July 2007/ Accepted 10 September 2007
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/mep2
ammonium permease mutant on ammonium-limiting medium. We demonstrate that glucose also inhibits filamentation by means of a pathway parallel to the cAMP-PKA pathway. Deletion of HXK2 shifted the pseudohyphal growth pattern on glucose to that of sucrose, while deletion of SNF4 abrogated filamentation on both sugars, indicating a negative role of glucose repression and a positive role for Snf1 activity in the control of filamentation. In all strains and in all media, sucrose induction of filamentation is greatly diminished by deletion of the sucrose/glucose-sensing G-protein-coupled receptor Gpr1, whereas it has no effect on induction by maltose and maltotriose. The competence of alpha-glucoside sugars to induce filamentation is reflected in the increased expression of the cell surface flocculin gene FLO11. In addition, sucrose is the only alpha-glucoside sugar capable of rapidly inducing FLO11 expression in a Gpr1-dependent manner, reflecting the sensitivity of Gpr1 for this sugar and its involvement in rapid sucrose signaling. Our study identifies sucrose as the most potent nutrient inducer of pseudohyphal growth and shows that glucose inactivation of Snf1 kinase signaling is responsible for the lower potency of glucose. |
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The cAMP-PKA pathway is directly activated by sugars through the G-protein-coupled receptor Gpr1. It has recently been shown that both glucose and sucrose are direct ligands for Gpr1 and that the affinity of Gpr1 for sucrose is significantly higher than for glucose (50% effective concentrations [EC50s], ±0.5 mM and ±20 mM, respectively) (12). Previous work has identified Gpr1 as a regulator of pseudohyphal differentiation on different fermentable carbon sources (18). Here, we have investigated the role of Gpr1 in the induction of filamentation on sucrose. We show that Gpr1 participates, together with Snf1-mediated signaling, in the induction of pseudohyphal growth on sucrose. We also demonstrate that signaling through Gpr1 triggers filamentous growth on sucrose under ammonium-rich conditions.
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1278b and are listed in Table 1. gpr1
/gpr1
strains were made prototrophic by transformation with a plasmid containing the appropriate marker: YCplac33/GPR1 (10) and YCplac33 (6) for strains indicated as wild type and gpr1
, respectively. |
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TABLE 1. Strains used in this study
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Monitoring of pseudohyphal growth. Pseudohyphal growth was monitored after 24 h on nitrogen-limiting (synthetic low ammonium [SLA]) medium as described previously (7). Hot agar medium supplemented with the appropriate sugars was poured onto a single-well microscope slide, and its surface was flattened with a second slide. Overnight cultures were washed twice in water and diluted to approximately 500 cells/µl. Ten microliters of this suspension was spotted on the agar surface, covered with a 24- by 50-mm coverslip, and incubated at 30°C in a moisturized sterile petri dish. Microscopic images of microcolonies were acquired with a Zeiss Axioplan2 microscope and a Zeiss Axiocam MRc 5.
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FIG. 1. Induction of pseudohyphal growth by alpha-glucoside sugars under nitrogen limitation conditions. (A) Sucrose is a more potent inducer of pseudohyphal growth than glucose at both high (100 mM) and low (10 mM) concentrations, and the effects of both sugars are dependent on Gpr1. WT, wild type. (B) Maltose and maltotriose have potencies similar to that of sucrose for induction of pseudohyphal growth, but their effects are independent of Gpr1. (C) Addition of glucose and sucrose, but not maltose, to derepressed cells causes rapid induction of FLO11 in a Gpr1-dependent manner. The relative expression of FLO11 was measured over a 2-hour interval after sugar addition by real-time quantitative PCR analysis. A diploid wild-type strain and a gpr1 /gpr1 mutant were grown overnight to mid-exponential phase (optical density at 600 nm, 2 to 4) on 2% glycerol. The error bars indicate standard deviations. (D) Induction of pseudohyphal growth by maltotriose, but not by sucrose or maltose, is deficient in a strain lacking the Agt1 (Mal11) transporter. Cells were grown for 24 h on nitrogen-limiting (SLA) medium supplemented with the indicated sugars. sucr, sucrose; malt, maltose; malt3ose, maltotriose. (E) A minimum level of cAMP is required for induction by alpha-glucoside sugars. A homozygous cyr1 yak1 pde2 mutant was grown on nitrogen-limiting medium (SLA) supplemented with 100 mM glucose, sucrose, maltose, or maltotriose. Intracellular cAMP concentrations were controlled by the addition of cAMP to the growth medium in the indicated concentrations. Pseudohyphal growth under these conditions was induced with external cAMP concentrations of 2 mM and higher. At all cAMP concentrations, sucrose and maltose were more potent inducers than glucose. Growth on maltotriose was reduced with increasing cAMP concentrations, and filamentation was limited.
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0.5 mM and 20 mM, respectively) (12), we concentrated on the role of Gpr1 as a sucrose sensor in the induction of pseudohyphal growth. We show that only induction by sucrose and glucose of pseudohyphal growth in the microcolonies is dependent on Gpr1 (Fig. 1A). Induction by maltose (18) (Fig. 1B) and maltotriose (Fig. 1B) is Gpr1 independent.
The induction of the pseudohyphal growth phenotype is known to be dependent on the cell surface flocculin Flo11 (14). We therefore measured FLO11 expression in glycerol-grown diploid yeast cells shifted from a derepressed to a repressed state by stimulation with glucose, sucrose, or maltose. Figure 1C shows that sucrose causes the strongest induction of FLO11 expression. The induction of FLO11 observed after the addition of glucose or sucrose was entirely dependent on Gpr1, which correlates well with the increase in cAMP concentration observed after stimulation of derepressed cells with these sugars (12). Maltose, while a strong inducer of pseudohyphal growth on nitrogen-limiting medium, is not an agonist of Gpr1 and is not capable of inducing a rapid increase in FLO11 expression. This suggests the absence of a rapid receptor-mediated signaling mechanism for the induction of filamentation by maltose. As an alternative to receptor-mediated signal transduction, we investigated the requirement for alpha-glucoside transport in pseudohyphal growth induction. We found that pseudohyphal growth on maltotriose, but not on maltose or sucrose, was abolished in an agt1
/agt1
mutant, which lacked the broad-specificity alpha-glucoside transporter required for maltotriose uptake in yeast (Fig. 1D).
Why do sucrose, maltose, and maltotriose stimulate filamentation under nitrogen starvation conditions to similar extents, as only sucrose was shown to be a direct inducer of cAMP-PKA signaling? To address this question, we hypothesized that a parallel signaling mechanism could be operative in the induction of pseudohyphal growth on alternative carbon sources. The presence of an additional signaling mechanism was also suggested by a significant residual filamentation pattern in a gpr1
/gpr1
mutant growing under nitrogen limitation conditions on sucrose (Fig. 1A, B, and D and 2B). Although a number of filaments still projected from the colony in a gpr1
/gpr1
mutant growing on sucrose, the fraction of pseudohyphae consisting of elongated, unipolarly budding cells was always smaller in a gpr1
/gpr1
mutant than in the wild type. The well-established intrinsic variability of pseudohyphal growth in yeast generated somewhat different filamentation patterns in different experiments. However, the relative induction of filamentation on glucose and sucrose was always higher in the wild type than in the gpr1
/gpr1
mutant in the same experiment (compare growth on sucrose in Fig. 1B and 2B). We examined the possibility of an additional signaling mechanism by constructing a diploid homozygous cyr1
yak1
pde2
mutant in which PKA activity could be controlled independently of the carbon source by addition of extracellular cAMP. This mutant showed pseudohyphal differentiation only when enough cAMP was added to the medium (Fig. 1E). Surprisingly, sucrose and maltose still proved to be more potent inducers of filamentation than glucose in the presence of permissive cAMP concentrations. In addition, the threshold concentrations of cAMP for the induction of filamentation were not significantly different for the three sugars, indicating that sucrose or maltose does not increase the sensitivity of the cells to cAMP (Fig. 1E). Addition of cAMP inhibited growth on maltotriose and to a lesser extent on maltose. Several key genes required for the utilization of maltose and maltotriose are strongly repressed by glucose. As glucose-responsive genes were recently shown to be redundantly regulated by PKA-dependent and PKA-independent signaling mechanisms (21), we speculate that this repression is mimicked by the addition of cAMP to the medium in the absence of glucose. Induction of pseudohyphal growth by glucose in the homozygous cyr1
yak1
pde2
mutant was also dependent on cAMP, but at all cAMP concentrations, filamentation was weaker than that observed with the alpha-glucoside sugars. This indicates that an additional Gpr1-independent pathway is responsible for the difference between glucose and the alpha-glucoside sugars.
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FIG. 2. Induction of pseudohyphal growth in nitrogen limitation medium by sucrose requires cAMP-PKA-, MAP kinase-, and Snf1-mediated signaling. (A) Induction of pseudohyphal growth by 100 mM sucrose is deficient in mutants of the cAMP-PKA pathway, in a flo11 mutant, and in a mutant in which the gene encoding Tec1, a filamentation-specific transcription factor under the control of the MAP kinase pathway, was deleted. WT, wild type. (B) In a strain with HXK2 deleted, pseudohyphal growth was induced by 100 mM glucose to an extent similar to that with 100 mM sucrose. The presence of Gpr1 remained important for filamentation in the hxk2 /hxk2 mutant. (C) FLO11 expression level. Sucrose, maltose, and maltotriose are better inducers than glucose of FLO11 expression in a wild-type strain. Induction by sucrose, but not by maltose and maltotriose, was dependent on Gpr1. In a hxk2 /hxk2 mutant, all sugars induced the same relative level of FLO11 expression. Gene expression was monitored 4 h after induction with 100 mM of the indicated sugars by real-time quantitative PCR. Bars shaded progressively from black to white represent induction by glucose, sucrose, maltose, and maltotriose, respectively. The error bars indicate standard deviations. (D) Pseudohyphal growth induction by 100 mM glucose and sucrose was absent in a snf4 /snf4 mutant. The snf4 /snf4 mutant was grown for 48 h on sucrose.
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As glucose also seemed to repress filament formation in the cyr1
yak1
pde2
mutant, we reasoned that the differences in filamentation on different carbon sources could be mediated by Snf1-dependent signaling. It was previously shown that the sugar starvation sensor Snf1 regulates FLO11-dependent processes (11). In the case of pseudohyphal growth, Snf1 was more recently shown to respond to nitrogen limitation in a TOR-dependent manner (19). During growth on alpha-glucoside sugars, we expected higher Snf1 activity, as many genes required for their uptake and metabolization, such as the SUC2 and MAL genes, are strongly repressed by glucose. Thus, for control of pseudohyphal growth, Snf1 may serve its established role as a glucose deprivation sensor, as well. To evaluate a possible role of glucose repression in filamentation, we deleted the gene encoding hexokinase 2, which plays an important role in the repression of Snf1 activity by glucose. We observed an increase in filamentation in a hxk2
/hxk2
mutant, in which glucose-induced inactivation of Snf1 activity was relieved and in which a strong defect in glucose repression occurred (9, 22). Figure 2B shows that in the hxk2
/hxk2
mutant, filamentation on glucose increased to the same level as observed with sucrose. In addition, the hxk2
/hxk2
mutant did not show hyperfilamentation on sucrose, indicating a specific link between Hxk2 and the repression of filamentation by glucose. A filamentation defect could be observed on both glucose and sucrose in a gpr1
/gpr1
hxk2
/hxk2
mutant, underscoring the role of Gpr1 in the sensing of both sugars. The effects of GPR1 and HXK2 deletion on pseudohyphal differentiation could be correlated with expression analysis of the FLO11 gene (Fig. 2C). Sucrose, maltose, and maltotriose were better inducers than glucose of FLO11 expression in a wild-type strain. In the hxk2
/hxk2
mutant, FLO11 expression was basically the same on all sugars. Deletion of Gpr1 had the most dramatic effect on FLO11 expression during growth on sucrose, where it caused a strong reduction. On glucose, maltose, and maltotriose, there was no such clear effect. We further confirmed a role for Snf1 activity in the induction of pseudohyphal differentiation by deleting its activating
subunit, Snf4. In an snf4
/snf4
mutant, filamentation was entirely absent on sucrose, indicating a key role of Snf1 activity for the induction of pseudohyphal growth on sucrose (Fig. 2D). The snf4
/snf4
mutant was unable to grow on maltose and maltotriose.
Gpr1 mediates induction of filamentation under nonstarvation conditions and in the absence of the ammonium permease Mep2.
Since alpha-glucosides are capable of inducing filamentation in a mutant deficient in cAMP synthesis, what could be the additional function of cAMP signaling by sucrose? It was previously reported that the addition of exogenous cAMP or the expression of gain-of-function Gpa2 or Ras2 mutant alleles could rescue filamentation in a mep2
/mep2
mutant. The precise connection between Mep2 and the cAMP-PKA pathway, however, remains unknown. In addition, recent work has shown that Mep2 might be required only for the reuptake of secreted ammonium, rather than acting as a low-ammonium sensor protein itself for induction of pseudohyphal growth through the PKA pathway or another signaling pathway (3). Since Gpr1 is a high-affinity sucrose sensor, we reasoned that the receptor might induce filamentation on sucrose by activating the cAMP-PKA pathway under conditions that were previously described as nonpermissive for filamentation. Indeed, we found that sucrose could induce pseudohyphal growth on nitrogen-rich growth media and also in a mep2
/mep2
mutant and that this induction was dependent on the expression of Gpr1 (Fig. 3A and B). Maltose, on the other hand, while a potent inducer of filamentation on nitrogen-limiting medium, is unable to induce pseudohyphal growth on nitrogen-rich media (Fig. 3C), which fits with the inability of maltose to activate Gpr1. To test whether the induction of pseudohyphal growth by sucrose on nitrogen-rich medium was dependent on cAMP, we measured filamentation in the cyr1
yak1
pde2
mutant in the presence of different external cAMP concentrations. Figure 3D shows that external cAMP was able to induce filamentation in this mutant on rich medium with both sucrose and maltose, and to similar extents. Thus, the induction of cAMP signaling through activation of Gpr1 seems to be the distinguishing feature allowing filamentous growth on sucrose but not on maltose in nitrogen-rich growth media.
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FIG. 3. Pseudohyphal growth induction on sucrose in nitrogen-rich medium and in the mep2 /mep2 mutant. (A) Sucrose induces pseudohyphal growth in nitrogen-rich medium, and this effect is dependent on Gpr1. Cells were grown overnight on minimal drop-out medium (S-URA) containing 5 g/liter ammonium sulfate or on complex YP medium. WT, wild type. (B) Sucrose (sucr), as opposed to glucose (glc), induced pseudohyphal growth in the mep2 /mep2 strain on nitrogen limitation medium, and this effect was dependent on Gpr1. (C) Maltose does not induce pseudohyphal growth on complex YP medium (YPM). SLAM, nitrogen limitation medium with maltose. (D) Sucrose and maltose are equally potent inducers of pseudohyphal growth on nitrogen-rich medium when the cells are provided with the same cAMP level. A homozygous cyr1 yak1 pde2 mutant was grown on nitrogen-rich minimal drop-out medium (S-URA) supplemented with sucrose or maltose for 24 h. Intracellular cAMP concentrations were controlled by the addition of extracellular cAMP as indicated. (E) Pseudohyphal growth was induced by 100 mM sucrose on nitrogen-rich complex medium (YPS) in a wild-type strain, but not in a mep2 /mep2 mutant.
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/mep2
mutant on ammonium-limiting medium. The sensitivity of Mep2 for rapid induction of the PKA pathway by addition of ammonium to nitrogen-starved cells was shown to be very high (EC50 = 2 µM) (20). This might explain why Mep2 could still fulfill its role as an ammonium sensor on ammonium-limiting medium, which contains only 50 µM of ammonium. It was recently shown that high ammonium levels repress genes involved in the production of secreted aromatic alcohols, which are known to induce filamentation in yeast (4). The upstream ammonium-sensing mechanism that mediates the repression of these genes in response to nitrogen availability remains to be identified. By observing filamentation in microcolonies, we showed that the fraction of cells in a colony displaying pseudohyphal growth especially is strongly increased during growth on alpha-glucoside sugars compared to glucose. The number of cells showing an elongated morphology and a unipolar budding pattern in a colony was found to be dependent on cAMP-PKA- and Snf1-dependent signaling. As the frequency of pseudohyphae in a colony is known to reflect the desilenced state of FLO11 (8), the induction of filamentation in the presence of an appropriate carbon source may be a prime in vivo function of the established histone H3 kinase activity of Snf1, which is also involved in other silencing-related processes, such as INO1 expression and ageing (2, 13, 15). We found that glucose is a poor inducer of filamentation compared to sucrose and other oligomeric alpha-glucoside sugars. Previous reports have suggested a link between Snf1 activity and diploid pseudohyphal growth through inhibition of the repressor proteins Nrg1 and Nrg2. However, as pseudohyphal growth is commonly monitored under nitrogen starvation conditions in the presence of high glucose levels, the requirement for Snf1 activity has been related to the sensing of nitrogen starvation rather than glucose signaling (11, 19). We have shown that Snf1 plays its established role as a glucose deprivation sensor during pseudohyphal growth on alternative carbon sources.
This study reveals how activation of the cAMP-PKA and the glucose repression pathways underlies the difference in potency between glucose and alpha-glucoside sugars for inducing diploid filamentous growth in yeast. We further investigated the preeminent role of sucrose as a nutrient inducer able to trigger filamentation in nitrogen-rich medium and in the mep2
/mep2
mutant on ammonium-limiting medium. We demonstrated that cAMP signaling through Gpr1 is responsible for the induction of pseudohyphal growth on nitrogen-rich media in the presence of sucrose and for the difference in filamentation potencies between sucrose and maltose in these media. An important role of Gpr1-mediated cAMP signaling might be to overrule the partial activation of the glucose repression pathway by the extracellular hydrolysis of sucrose to glucose and fructose catalyzed by periplasmic invertase (Suc2). A simplified scheme depicting the signaling mechanisms involved in the sensing of different carbon sources is shown in Fig. 4.
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FIG. 4. Simplified scheme depicting the sensing and signaling components involved in the induction of pseudohyphal growth by hexose (glucose and fructose) and alpha-glucoside sugars (sucrose, maltose, and maltotriose). Glucose and sucrose activate PKA through Gpr1, Gpa2, and adenylate cyclase (Cyr1), leading to the induction of FLO11 transcription by controlling the activities of transcription regulators, such as Flo8 and Sfl1. Monomeric hexose sugars inhibit pseudohyphal growth by inactivating the Snf1 kinase upon uptake by hexose transporters (Hxts) and phosphorylation by hexokinase 2 (Hxk2). Snf1 is known to induce filamentation by inactivating the repressor proteins Nrg1 and Nrg2 and is itself activated by its subunit, Snf4. Maltotriose and possibly other alpha-glucoside sugars activate pseudohyphal growth upon or after transport across the plasma membrane by alpha-glucoside transporters (Agts). The ammonium permease Mep2 is required for pseudohyphal growth in the presence of ammonium, but how it links to the other pathways is unclear.
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Published ahead of print on 21 September 2007. ![]()
Present address: Peptide Biology Laboratories, Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037. ![]()
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homolog. EMBO J. 16:7008-7018.[CrossRef][Medline]
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